The downgrade process is as I've already described. You need to uninstall version 3.9.5 and install 3.9.4.
For URLs:
When you uninstall JoomSEF, all the tables in your database starting with jos_sef will have the _bak suffix added, so no data are lost. When you install the older version again, delete all the tables starting with jos_sef in your database that don't end with _bak, and then rename the ones with _bak so that you remove the _bak suffix.
For configuration:
There's currently no way to automatically preserve configuration when downgrading. You will need to set it manually after installation of older version. You can eg. make a screenshot of your Configuration and reset it manually after new installation.